Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPENDTGISEFVLLGLSEEPELQPFLFGLFLSMYLVTVLGNLLIILATISDSHLHTPMYFFLSNLSFADICFISTTIPKMLINIQTQSRVITYAGCITQMCFFVLFGGLDSLLLAVMAYDRFVAICHPLHYT-VIMNPRLCGLLVLASWMIAALNSLSQSLMVLWLSF----CTDLEIPHFFCE---LNQVIH---LACS-DTFLNDMGMY---FAAGL-----LAGGPLVGILCSYSKIVSSIRAISSAQGKYKAFSTCASHLSVV---SLFC--CTGLGVYLTSAATHNSHTSATASVMYTVATPMLNPFIYSLRNKDIKRALKMSFRGKQ |
| 3RFM Chain:A ((14-304)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-FAITISTGFCAACH-GCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAI-CWVLSFAIGLTP--MLGWNNCGQPGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGER-ARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNS-----------VVNPFIYAYRIREFRQTFRKIIRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192542 for 1911 contacts (-100.8/contact) +
2D Compatibility (PS) -26193 + (NN) -1853 + (LL) 3244
1D Compatibility (HY) -24400 + (ID) 3600
Total energy: -245344.0 ( -128.39 by residue)
QMean score : 0.233
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