Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGSKPRVHLYILPCASQQVSTMGDRGTSNHSEMTDFILAGFRVRPELHILLFLLFLFVYAMILLGNVGMMTIIMTDPRLNTPMYFFLGNLSFIDLFYSSVIEPKAMINFWSENKSISF-AGCVAQLFLFALLIV---TEGFLLAAMAYDRFIAICNPLLYSVQMSTRLCTQLVAGSYFCGCISSVIQTSMTFTLSFCASRAVDHFYCDSRPLQRLSC--SDLF-IHRMISFSLSCIIILPTIIVIIVSYMYIVSTVLKIHSTEGH----KKAFSTCSS--HLGVVSVLYGAVF------------FMYLTPD--RFPELSKVASLCYSLVTPMLNPLIYSLRNKDVQEALKKFLEKKNIIL |
| 3PWH Chain:A ((14-304)) | --------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAI------TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIA---ICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204208 for 1855 contacts (-110.1/contact) +
2D Compatibility (PS) -25707 + (NN) -3843 + (LL) 5424
1D Compatibility (HY) -22800 + (ID) 2850
Total energy: -253984.0 ( -136.92 by residue)
QMean score : 0.369
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