Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGTKLEDSPPCRNWSSASELNETQEPFLNPTDYDDEEFLRYLWREYLHPKEYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVI--IWIVSCIIMI------------PQAIVMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQRKWKPLQPVSQPRGPGQPTKSRMSAVAAEIKQIRARRKTARMLMIVLLVFAICYLPISILNVLKRVFGMFAHTEDRETVYAW-FTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFSCCCLGVHHRQEDRLTRGRTSTESRKSLTTQISNFDNISKLSEQVVLTSISTLPAANGAGPLQNW |
| 4BVN Chain:A ((16-296)) | --------------------------------------------------------LLMALVVLLIVA--GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASVETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQA--LKCYQD-PG---------CCD-----FVTNRAYAIASSIISFYIPLLIMIFVALRVYR---------------------EAKEQIR------KRKTSRV-----MLMREHKALKTLGIIMGVFTLCWLPFFLVNIV--------NVFNRDLVPKWLFVAFNWLGYANSAMNPIILC-RSPDFRKAFKRLLA---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237514 for 1954 contacts (-121.6/contact) +
2D Compatibility (PS) -26363 + (NN) -4615 + (LL) 10736
1D Compatibility (HY) -30800 + (ID) 4650
Total energy: -293206.0 ( -150.05 by residue)
QMean score : 0.278
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