Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAVDNLTSAPGNTSLCTRDYKITQVLFPLLYTVLFFVGLITNGLAM---RIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAK--LGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTTRPFKTSNPKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHEIVNYICQVIFW--INFLIVIVCYTLITKELYRSYVRTRGVGKVPR--KKVNVKVFIIIAVFFICFVPFHFARIPYTLSQTRDVFDCTAENTLFYVK-ESTLWLTSLNACLDPFIYFFLCKSFRNSLISMLKCPNSATSLSQDNRKKEQDGGDPNEETPM |
| 4N6H Chain:A ((131-412)) | ------------------------------LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIF--NLALADALATSTLPFQ---SAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAV-VCMLQFPSPSWYW-DTVTKICVFLFAFVVPILIITVCYGLMLLRLR-SVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL------VDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198066 for 2023 contacts (-97.9/contact) +
2D Compatibility (PS) -27342 + (NN) -5144 + (LL) 3188
1D Compatibility (HY) -26000 + (ID) 3900
Total energy: -257264.0 ( -127.17 by residue)
QMean score : 0.176
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