Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMG-IMCVLSVCWSPLLIMMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVY-------LLLRKILLRKFCQIRYHTNNYASSSTSLPCQCSSTLMWSDHLER |
| 4GBR Chain:A ((98-286)) | -----------------------------------------------------------------------------------------------------------------------------------------------------VIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPI------QMHW-----YRATHQEAINCYAEETCCDFFTNQAYA---IASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEHKALKTLGIIMGTFTLCWLPFFIV---------NIVHVIQDNLIRKEV--YILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97137 for 1062 contacts (-91.5/contact) +
2D Compatibility (PS) -18950 + (NN) -9299 + (LL) 12800
1D Compatibility (HY) -18400 + (ID) 2000
Total energy: -132986.0 ( -125.22 by residue)
QMean score : 0.201
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