Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSLYSEYLNPNKVQEHYNYTKETLETQETTSRQVASAFIVILCCAIVVENLLVLIAVARNSKFHSAMYLFLGNLAASDLLAGVAFVANTLLSGSVTLRLTPVQWFAREGSAFITL------SASVFSLLAIAIERHVAIA-KVKLYGSDKSCRMLLLIGASWLISLVLGGLPILGWNCLG-------HLEAC---------STVLPLYAK---HYVLCVVTIFSIILLAIVALYVRIYCVVRSSHADMAAP------QTLALLKTVTIVLGVFIVCWLPAFSILLLDYACPVHSCPILYKAHYFFAVSTLNSLLNPVIYTWRSRDLR---REVLRPLQCWRPGVGVQGRRRGGTPGHHLLPLRSSSSLERGMHMPTSPTFLEGNTVV |
| 4UG2 Chain:A ((21-304)) | -----------------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGV-------LAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVL----VPLLLMLGVYLRIFLAARRQL------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225743 for 1731 contacts (-130.4/contact) +
2D Compatibility (PS) -24998 + (NN) -14184 + (LL) 6788
1D Compatibility (HY) -26000 + (ID) 4000
Total energy: -288137.0 ( -166.46 by residue)
QMean score : 0.209
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