Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH |
| 2KS1 Chain:B ((162-173)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGIGLFMRRRHI----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -826 for 39 contacts (-21.2/contact) +
2D Compatibility (PS) -1196 + (NN) -1270 + (LL) 15152
1D Compatibility (HY) -800 + (ID) 100
Total energy: 10960.0 ( 281.03 by residue)
QMean score : -0.183
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