Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------AVTCGDVMSAIPPCMSYATGQASSPSAGC---CSGVRTLNGKAS-----------TSADRQAACRCLKNLAGSF-----NGISMGNAANIPGKCGVSVSFPINNNVNCNNLH-------- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18583 for 409 contacts (-45.4/contact) +
2D Compatibility (PS) -8780 + (NN) -2519 + (LL) 32
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -32900.0 ( -80.44 by residue)
QMean score : 0.339
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