Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGDVTSAVAPCMSYASGKASAPSGACCSGVRTLNAKASTPADRKAACNCLKNLAGS--GISMGNAASIPGKCGVSVSIPISTKTNCNNLH
1SIY Chain:A ((1-91))
-MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSIN
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52612 for 679 contacts (-77.5/contact) +
2D Compatibility (PS) -9115 + (NN) -2649 + (LL) 116
1D Compatibility (HY) -8400 + (ID) 1900
Total energy: -74560.0 ( -109.81 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: