Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------ITCGQVNS--AVGPCLTYARGGAGPSAAC---CSGVRSLKAAAS-----------TTADRRTACNCLKNAARGI-----KGLNAGNAASIPSKCGVSVPYTISASIDCSRVS-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNA-APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32572 for 455 contacts (-71.6/contact) +
2D Compatibility (PS) -9274 + (NN) -3442 + (LL) 8
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -49430.0 ( -108.64 by residue)
QMean score : 0.433
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