Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ECQVTQLAVCASAILGGTKPSGECCGNLRA-----------QQGCFCQYVKDPNYGHYVNSPHARETLQTCGIALPHC
1SIY Chain:A ((7-78))
---QGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR-GINPNNAEALPGKCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22719 for 395 contacts (-57.5/contact) +
2D Compatibility (PS) -5968 + (NN) 2754 + (LL) 424
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -28159.0 ( -71.29 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: