Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAPPPPPQCDPG--LLSPCAAPIFFGTAPSASCCSSLKA-----------QQGCFCQYAKDPTYASY--INSTNARKMIAACGIPFPNCS
2ALG Chain:A ((2-79))
------ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27100 for 382 contacts (-70.9/contact) +
2D Compatibility (PS) -6288 + (NN) -733 + (LL) -44
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -39165.0 ( -102.53 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: