Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRVLSEDKKVACIVT--DLQVCLSALETPIPPSAECCKNLKI-----------QKSCLCDYMENPSIEKY--LEP--ARKVFAACGMPYPRC
2ALG Chain:A ((2-79))
---------ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23070 for 360 contacts (-64.1/contact) +
2D Compatibility (PS) -6039 + (NN) -1269 + (LL) 1148
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -34330.0 ( -95.36 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: