Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KTLILGEEVKATCDFT--KFQVCKPEIITGSPPSEECCEKLKE-----------QQSCLCAYLISPSISQY--IG--NAKRVIRACGIPFPNCS
2ALG Chain:A ((2-79))
----------ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19736 for 368 contacts (-53.6/contact) +
2D Compatibility (PS) -6248 + (NN) -3449 + (LL) 1352
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -32931.0 ( -89.49 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: