Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQPSCAAQLTQLAPCARVGVAPAPGQPLPAPPAECCSALGAVSH----------DCACGTL----------DIINSLPAKCGLPRVTCQ
1T12 Chain:A ((2-76))
--ITCGQVTSNLAPCLAYLR---NT---G-PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVN-----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20111 for 337 contacts (-59.7/contact) +
2D Compatibility (PS) -5792 + (NN) -6991 + (LL) 1208
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -35636.0 ( -105.74 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: