Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
CNINANHLEKCRPAVIGDNPPSPIKECCELLQAANL----------KCICRFKSVLPVL-AVYPSKVQALLSKCGLTTI----P-PACQALRN
1T12 Chain:A ((4-90))
CGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTC-LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52560 for 475 contacts (-110.7/contact) +
2D Compatibility (PS) -7045 + (NN) -1497 + (LL) -188
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -64590.0 ( -135.98 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: