Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGK--------SPSCLCAVMLSGTAKMA-GIKPEVAITIPKRCNMADRPVGYKCGDYTLP
1BWO Chain:A ((2-78))
----------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGI---ARGIHNLNEDNARSIPPKCGVNLP------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30828 for 440 contacts (-70.1/contact) +
2D Compatibility (PS) -6879 + (NN) -2969 + (LL) -92
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -44718.0 ( -101.63 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: