Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDECGATPPDQEALKLVPCVAAGKDPDSKPSDRCCAAVKEIGE-------RSPACLCAVLLSKIVRRV-GVKPEVAITIPKRCDLTDRPIGYKCGDYTMPSLQLKD
2ALG Chain:A ((2-79))
------ITCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQ-LSASVPGVNPNNAAALPGKCGVSIP------------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26183 for 453 contacts (-57.8/contact) +
2D Compatibility (PS) -7453 + (NN) -5311 + (LL) 944
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -42503.0 ( -93.83 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: