Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGR--------NPKCLCAVMLSNTARSA-GVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
2ALG Chain:A ((3-79))
-------TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LK-QLSASVPGVNPNNAAALPGKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28111 for 434 contacts (-64.8/contact) +
2D Compatibility (PS) -6885 + (NN) -2612 + (LL) 632
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -42476.0 ( -97.87 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: