Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGPAGCQDDVVALNEACYQYVQKGAPTVPPSQECCDAVRRVDV----------PCVCSYLGSPGVRD--NISMEKVFYVSQQCGVSIPGNCGGSKV
1AFH Chain:A ((3-80))
-----SCGQVASAI-APCISYARGQGS--GPSAGCCSGVRSLNNAARTTADRRAACNC-LK-NA-AAGVSGLNAGNAASIPSKCGVSIP--------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41298 for 470 contacts (-87.9/contact) +
2D Compatibility (PS) -6855 + (NN) -1206 + (LL) -440
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -53099.0 ( -112.98 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: