Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DLRKGCYDLGITVLMGCPDSIDKKLPAPPTPSEGCCTLVRTIGM----------KCVCEIVNKKIEDT--IDMQKLVNVAAACGRPLA----PGSQCGSYRVPGA
1T12 Chain:A ((3-90))
----TCGQVTSN-LAPCLAYLRNTG-----PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV-----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35869 for 483 contacts (-74.3/contact) +
2D Compatibility (PS) -7358 + (NN) -2050 + (LL) 664
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -48963.0 ( -101.37 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: