Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDTGAAAGVPSCASKLVPCGGYLNATAAPPPASCCGPLREAAA-------NETACLCAILTNKAALQAF-GVAPEQGLLLAKRCGVTTDASACAKSASSSATAAAAAAV
2ALG Chain:A ((3-79))
--------TCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNC--LKQL--SASVPGVNPNNAAALPGKCGVSIP--------------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26296 for 441 contacts (-59.6/contact) +
2D Compatibility (PS) -7181 + (NN) -2905 + (LL) 3160
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -39022.0 ( -88.49 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: