Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASPTCDTVQNILAPCAGFLTGQ-EPSKACCTGVNNLNNSRKTKADRVAVCNCIKELTKSI-AYDPKRMPLLSTKCGVKPDFPAVDKNLDCSKLPV
1SIY Chain:A ((1-91))
--MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYK-ISTSTNCNSIN-
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50336 for 686 contacts (-73.4/contact) +
2D Compatibility (PS) -9096 + (NN) -5689 + (LL) 452
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -73169.0 ( -106.66 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: