Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------ALTCGTVNSNVAPCIGYITQGGPLPR---ACCTGVSKLNSMAR-----------TTPDRQQACRCLKTAASAL----GPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23443 for 417 contacts (-56.2/contact) +
2D Compatibility (PS) -8643 + (NN) -879 + (LL) -360
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -36375.0 ( -87.23 by residue)
QMean score : 0.452
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