Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQIQDFIDCLNVIIYFSSCIGYIDGHVREPTWGC---CMGVHELNRLVK-----------QDRDAQKICQCIELIAAVD----DPPFVLANIDALPSKCQTHLSFPISVKKNCSEVQ-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA---GSVVDALRAVRNA------APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28364 for 451 contacts (-62.9/contact) +
2D Compatibility (PS) -8666 + (NN) -8 + (LL) 300
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -38438.0 ( -85.23 by residue)
QMean score : 0.333
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