Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIGCGTVVS--YLNPCLPYVTNKGPLGSC---CGGVKGLYGAAQ-----------TAQDRQSVCSCLKSLAGSY-----KDVDLNKAAGLPGQCGVNIPYKISPSTDCSKVN-------- |
| 1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35266 for 461 contacts (-76.5/contact) +
2D Compatibility (PS) -8879 + (NN) -884 + (LL) -124
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -48003.0 ( -104.13 by residue)
QMean score : 0.391
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