Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ACN--PSELMACASSILQSKP-PTAQCCAKLK-----------EQQPCFCQYKKDPSLKGYINPANFKKVAA-CRVQVP---------KC---
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17987 for 355 contacts (-50.7/contact) +
2D Compatibility (PS) -6023 + (NN) 1309 + (LL) 92
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -27009.0 ( -76.08 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: