Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------ANPCNPAQL---TPCAGPALFGGAVPPACCAQLRAQQGCLCGYARSPNYGSYIRSPNAARLFAICNLPMP----------RCR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
1PS6 Chain:A ((1-328)) | VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23284 for 331 contacts (-70.3/contact) +
2D Compatibility (PS) -7816 + (NN) -8178 + (LL) 0
1D Compatibility (HY) -400 + (ID) 400
Total energy: -40078.0 ( -121.08 by residue)
QMean score : 0.267
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