Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATICNIDTSKLAECLPAVSGRSPPPPTKACCTALLSADL----------HCLCNYKSALPAF-GINPALAMALPKKCGGSLP----PNCKVDAEP
1T12 Chain:A ((2-90))
-ITCGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTC-LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV-
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38976 for 497 contacts (-78.4/contact) +
2D Compatibility (PS) -7821 + (NN) -6558 + (LL) -496
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -58351.0 ( -117.41 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: