Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAQCKEERRLGLNACKPVVYG-RPPSPQCCQRIRVTHI----------ECVCPVVTPKLAALIDVNRAIRVIEGCGRRVP----RHFKCGSKLSPPPIHMRFLQADL
1BWO Chain:A ((2-89))
-----DCGHVDSLV-RPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR----------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17037 for 460 contacts (-37.0/contact) +
2D Compatibility (PS) -7451 + (NN) -1576 + (LL) 1460
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -27504.0 ( -59.79 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: