Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GVVGVAGASCNAG--QLTVCAGAIAGGARPTAACCSSLRA-----------QQGCFCQFAKDPRYGRY--VNSPNARKAVSSCGIALPTCH
2ALG Chain:A ((2-79))
-------ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22527 for 382 contacts (-59.0/contact) +
2D Compatibility (PS) -6282 + (NN) 1123 + (LL) 700
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -32386.0 ( -84.78 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: