Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------------------------------------------------------------ACNPSELM-ACSSSILQSKPPTAQCCAKLKEQQPCFCQYKKD-PSLKGYINPANFKKVAACRVQVPKC
1ELK Chain:A ((1-153))
SDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVTI--YEDLRRKGLEFPM-
General information:
TITO was launched using:
RESULT:
Template:
1ELK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7927 for 383 contacts (-20.7/contact) +
2D Compatibility (PS) -6835 + (NN) -3248 + (LL) 120
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -21090.0 ( -55.07 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_1ELK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ELK-query.scw
PDB file :
Tito_Scwrl_1ELK.pdb
: