Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNKDCICNALRA-----------------------ATTFTTTCNLPS-LDCGITI
2DS2 Chain:B ((8-70))
---------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACPFR-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25924 for 208 contacts (-124.6/contact) +
2D Compatibility (PS) -4230 + (NN) -2770 + (LL) 1440
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -36084.0 ( -173.48 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: