Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCTSQLNNLNVCAPFVVPGAANTNPNAECCNALEAVQHDCLCSTLQ-----------ISSRLPSQCNLPPLTCGN
1N89 Chain:A ((4-67))
------ASQLAVCASAILSG---AKPSGECCGNLRAQQ-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC--
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26899 for 318 contacts (-84.6/contact) +
2D Compatibility (PS) -5646 + (NN) -4269 + (LL) 440
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -40024.0 ( -125.86 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: