Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQLNSLNVCAPFVV-----PGATNTNPNAECCSALQSVEHDCLCNTLR-----------------------IAARLPSQCNLAPVNCGNW
1HSS Chain:A ((14-104))
------VPALPACRPLLRLQCNGSQV-PEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV-----
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46294 for 324 contacts (-142.9/contact) +
2D Compatibility (PS) -5556 + (NN) -1930 + (LL) 112
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -59168.0 ( -182.62 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: