Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCQNQLNSLNVCAPFVVPGAANTSPNAECCNALESVQNDCICNTLRI-----------------------AGRLPSLCNLSP-INCGN
2DS2 Chain:B ((8-68))
---------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACP-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22411 for 197 contacts (-113.8/contact) +
2D Compatibility (PS) -3925 + (NN) -2299 + (LL) 940
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -32845.0 ( -166.73 by residue)
QMean score : 0.344
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: