Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSADCAATAESLSPCASAVGNNPQDPTPECCAVLQTANVDCICALVQ-----------------------STMQLPSECGLET-PQCPSD
2DS2 Chain:B ((8-69))
---------------------------RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACPF-
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22365 for 204 contacts (-109.6/contact) +
2D Compatibility (PS) -4153 + (NN) -5234 + (LL) 700
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -35152.0 ( -172.31 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: