Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLSAAGNVRAAVPPTCCSKVGSLIK---T----APKCLCAVLLSPLAKQA-GIKPGIAITIPKRCNIGNR-PAGKKCGSK
1BWO Chain:A ((2-82))
-------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA---RGIHNLNEDNARSIPPKCGVNLPYTIS------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37145 for 467 contacts (-79.5/contact) +
2D Compatibility (PS) -7389 + (NN) -2303 + (LL) 404
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -49933.0 ( -106.92 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: