Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLCDIDDKGLADCKPSVTQPNPVDPSPDCCEALKGAD----------LACLCSYKNSMWLPSFGIDPMLALSLPPKCNLQMPPNC
1BWO Chain:A ((2-78))
--DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI--HNLNEDNARSIPPKCGVNLP---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9369 for 435 contacts (-21.5/contact) +
2D Compatibility (PS) -6924 + (NN) -7237 + (LL) -292
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -25972.0 ( -59.71 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: