Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TWEVKMAGAELSDAQCKEERNLGINACKPVVYG-KL-PSPECCQRVRVTHL----------ECVCPVISPQLAA--LIDINRAVRLIEGCGRRVP----RHYKCGSITTP
1AFH Chain:A ((3-92))
--------------SCGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37934 for 512 contacts (-74.1/contact) +
2D Compatibility (PS) -7575 + (NN) -2292 + (LL) 1432
1D Compatibility (HY) -800 + (ID) 850
Total energy: -48019.0 ( -93.79 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: