Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSSPDNEAIKLAPCAEAAQDQNAAVSASCCDQVRKIGR--------SPSCLCAVMLSNTAKAS-GIKPEIAITIPKRCNIANRPVGYKCGPYTLP
1BWO Chain:A ((2-78))
-------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA---RGIHNLNEDNARSIPPKCGVNLP------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22565 for 440 contacts (-51.3/contact) +
2D Compatibility (PS) -6750 + (NN) -483 + (LL) -8
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -32906.0 ( -74.79 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: