Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDILKLTPCVAASRNAKVMPSRQCCSNIAGMGKGLP-G----AKCLCSLLSHPLARSQ-GVAPRIALGIPQKCRIAVP----RGFVCQGIRVPGS
1T12 Chain:A ((6-89))
--QVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSA-AGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29956 for 503 contacts (-59.6/contact) +
2D Compatibility (PS) -7306 + (NN) -1079 + (LL) 852
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -41289.0 ( -82.09 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: