Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACGS-SYDLAACLPAAESDIQPSAQCCTQLSSYLATDT-----PEECLCQTAYSPFFQSGADIQFAIKIPQKCNLSYR----AGIQCNGNTIPGGQ
1BWO Chain:A ((3-88))
-CGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI-HNLNEDNARSIPPKCGVNLPYTISLNIDCS--------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18222 for 480 contacts (-38.0/contact) +
2D Compatibility (PS) -7688 + (NN) -727 + (LL) -96
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -31633.0 ( -65.90 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: