Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDIDLLLPCLNASRDPRVKPDKRCCDAIRQFLPPRKQKSAIDCLCRLATSKEAVALKINLSAAIAIPQKCGIKFE----QRFYCQGRLVPGS
2ALG Chain:A ((5-91))
-GQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV-----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34320 for 537 contacts (-63.9/contact) +
2D Compatibility (PS) -8597 + (NN) -1003 + (LL) 272
1D Compatibility (HY) 0 + (ID) 950
Total energy: -44598.0 ( -83.05 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: