Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPADRMALKLAPCASAGQDPASAPSSGCCTAVHTIGKQ-------SPKCLCAVMLSNTARSA-GIKPEAAITIPKRCNLVDR-PVGYKCGAYTLP
1SIY Chain:A ((2-82))
-------TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSC--LKA-AAGAVRGINPNNAEALPGKCGVNIPYKIS---------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30098 for 530 contacts (-56.8/contact) +
2D Compatibility (PS) -7686 + (NN) -5401 + (LL) 920
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -47165.0 ( -88.99 by residue)
QMean score : 0.182
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: