Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTTCDNNINGILSNC-----KSTNPSPACCSFMRKITL----------ECVCPRITSDVTKYISLSSILTIAKICHRTLP----HQYQCGSYLLP
1BWO Chain:A ((2-89))
--DCGHVDSLV-RPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29687 for 398 contacts (-74.6/contact) +
2D Compatibility (PS) -6733 + (NN) 1888 + (LL) 456
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -36326.0 ( -91.27 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: