Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQGQATQPAQSCCSGLKSIAG-------SNPACLCSLISANAGSIPGINSTLALELPAKCNLQGL----NPSLCSVFISGFLPLR
2ALG Chain:A ((3-90))
-----TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT---------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43904 for 487 contacts (-90.2/contact) +
2D Compatibility (PS) -7721 + (NN) -1900 + (LL) 1236
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -57839.0 ( -118.77 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: