Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------SHNVGALASSCEESDFLYKSLPCVKGGTVMSTPSSQCCVAV----------RAMALECLCRLIVSATGASSEQTVKNYVKTCKMKAPPGFKC------------------------------------------------------------------------- |
2A35 Chain:A ((4-215)) | TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSI--FYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIAGKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGKGS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2A35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12727 for 426 contacts (-29.9/contact) +
2D Compatibility (PS) -8082 + (NN) 2494 + (LL) -16
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -22531.0 ( -52.89 by residue)
QMean score : -0.010
|
|
|