Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYCDLTTLLPCLSSVIGDKPTPPSEECCAVVRVVDP----------DCVCGHVGDDEGIT-GINVKLAAQIPKKCGRHVP----KGFKCGEH
1T12 Chain:A ((8-89))
----TSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTC-LKSA-AGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK-
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26352 for 437 contacts (-60.3/contact) +
2D Compatibility (PS) -6699 + (NN) -2689 + (LL) -436
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -39626.0 ( -90.68 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: