Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGTVTGSLAPCIGYLKGG---SG-------------------PSAACCGGVKRLNSAATTTPDRQAACNCLKSAAGAIS--G-L-------NPNIAAGLPGKCGVNIPYKISTSTNCATIRA
1PSY Chain:A ((25-122))
--------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV--RCMRQT---------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29850 for 503 contacts (-59.3/contact) +
2D Compatibility (PS) -6681 + (NN) -2301 + (LL) 1544
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -42188.0 ( -83.87 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: